LSHTM Data Compass2026 · dataset · unknown
Inflammatory Biomarkers of Asymptomatic and Symptomatic TuberculosisThis dataset contains the serum protein expression data analysed for the article “Inflammatory Biomarkers of Asymptomatic and Symptomatic Tuberculosis” (doi: https://doi.org/10.1101/2025.10.26.684319). The study characterized the biology of asymptomatic tuberculosis (TB) by analyzing blood transcriptomic and proteomic data from South African cohorts. The study characterized the biology of asymptom
LSHTM Data Compass2026 · dataset · unknown
TDR-R Healthcare Worker Ease-of-Use Questionnaire for the Evaluation of a Measles Rapid Diagnostic TestThis resource contains the Healthcare Worker Ease-of-Use Questionnaire developed for the clinical evaluation of a rapid diagnostic test (RDT) for measles. The questionnaire is designed to assess healthcare workers' experience and ease of use of the rapid diagnostic test during its implementation in clinical settings. It collects information on aspects such as the clarity and simplicity of the test
LSHTM Data Compass2026 · dataset · unknown
Klebsiella oxytoca Species Complex K locus database (v2.1.0)This represents an archived version of the K. oxytoca Species Complex K locus database. This version of the database was used to generate the data reported in the primary database publication: Ashcroft, M. / McGarry N. et al. Genomic characterisation of capsule polysaccharide loci in the Klebsiella oxytoca Species Complex. DOI: https://doi.org/10.64898/2026.07.16.739023.
LSHTM Data Compass2026 · dataset · unknown
Data and code files for Evaluating Public Health Interventions textbookData and code files to accompany the self-directed learning exercises in Chapters 10-15 of the textbook Evaluating Public Health Interventions, edited by Tim Colbourn and James Hargreaves and published by UCL Press in 2026. This is an open access textbook published under a Creative Commons Attribution-Non Commercial 4.0 International licence (CC BY-NC 4.0). Description of the textbook: Drawing on
LSHTM Data Compass2026 · Archive
Codelists created for post-infection outcomes studies (dementia, diabetes, and post-hospitalisation care pathways)A set of 63 codelists associated with three studies: (1) The association between dementia and hospital admission, repeat antibiotics, falls and fractures following community-diagnosed infection: a cohort study; (2) The association between diabetes, and falls and fractures following community-diagnosed infection: a cohort study; and (3) A multistate model of care pathways following hospitalisation
LSHTM Data Compass2026 · dataset · unknown
Are Older Adults in China Living Longer Happy Years? A Cohort-Based Multistate Analysis, 2002–2018Data and code produced as part of a study to investigate happy life expectancies among a Chinese population.
LSHTM Data Compass2026 · dataset · unknown
Plastic Pollution in Agrifood Systems and One Health FrameworkAn interactive framework illustrating impact pathways from plastic pollution in agrifood systems the environment, animals and humans (One Health).
LSHTM Data Compass2026 · dataset · unknown
Modifiable risk factors of neural tube defects in eastern Ethiopia: A community based case-control studyData for "Modifiable risk factors of neural tube defects in eastern Ethiopia: A community based case-control study".
LSHTM Data Compass2026 · dataset · unknown
GSM Gambia PCR_RDTDataset from the Gambian hub of the Genomic Surveillance of Malaria in West Africa (GSM) study, on malaria RDT and PCR results at recruitment.
LSHTM Data Compass2026 · dataset · unknown
mpox-ct-drc: code and data for estimating mpox qPCR false positives in DR CongoBayesian latent class model to estimate the probability that a positive MPXV qPCR result from a suspected mpox case represents a true infection, using Ct values from four sites in the Democratic Republic of the Congo, with a serological mixture model used for external validation. Reproduces the analyses in O'Driscoll et al., 2026.
LSHTM Data Compass2026 · dataset · unknown
Health related quality of life of children with neural tube defects in eastern EthiopiaData were collected to determine the health related quality of life of children with neural tube defects.
LSHTM Data Compass2026 · dataset · unknown
Vulnerable Newborn Collaboration - Birth statisticsData collected as part of a multi-country study to improve understanding of stillbirth epidemiology, inform stillbirth prevention, and improve burden estimates. It lists the number of livebirths, stillbirths, and neonatal deaths for 31 National and subnational settings during the period 2000-2024.
LSHTM Data Compass2026 · dataset
Extraction and appraisal workbook for a systematic review of large language models in first-contact primary health careStudy-level extraction, quality appraisal and risk-of-bias data for a systematic review of large language models (LLMs) used for diagnostic, triage and referral decision support in first-contact primary health care. The dataset covers 71 studies published in English between 1 January 2022 and 1 June 2026, identified by searching PubMed/MEDLINE, Embase (Ovid), Scopus and Web of Science Core Collect
LSHTM Data Compass2026 · dataset · unknown
Additional file 2 of DNA methylation marks associated with body composition in children from India and the Gambia: findings from the EMPHASIS studyData for the publication, "DNA methylation marks associated with body composition in children from India and the Gambia: findings from the EMPHASIS study".
LSHTM Data Compass2026 · dataset · unknown
TDR-R Case Report Forms and KoboToolbox Data Dictionaries for the Evaluation of a Measles Rapid Diagnostic TestThis resource contains the Case Report Forms and KoboToolbox Data Dictionaries (electronic Case Report Form (eCRF)) files developed for the clinical evaluation of a rapid diagnostic test (RDT) for measles. The KoboToolbox and ODK-based eCRF forms were used for standardized collection and management of study data, including participant screening and enrolment, demographic and clinical information,
LSHTM Data Compass2026 · dataset
Search strategies for "Evidence of post-diagnosis inequalities in cancer care in the UK since 2012: A scoping review"This file contains details of the search methodology and individual search strategies used to retrieve information for this scoping review. Search strategies were created for the EBSCOhost CINAHL Complete, Ovid Embase, Ovid Medline, Ovid APA PsycInfo and Web of Science Core Content databases.
LSHTM Data Compass2026 · Archive
IMBA Hutano: uptake and yield of screening, linkage and outcomes datasetData collected as part of a nested sub-study within the ERASE-TB project to deliver an integrated health check to members of tuberculosis-affected households. Data was collected at baseline through an interviewer-administered questionnaire and clinical screening, followed by linkage to care assessments obtained via telephone follow up and provider records, and a final assessment at 12 month follow
LSHTM Data Compass2026 · dataset · unknown
Data for: "Estimates of global burden of snakebite: A literature review and geostatistical modelling study"BACKGROUND: Snake envenoming (SE) remains an important public health problem, disproportionately affecting impoverished rural communities in tropical and subtropical regions. Although previous attempts have been made to quantify the global burden of SE, accurate, up-to-date data remain scarce. Here we present a comprehensive re-evaluation of the global burden of snakebite, 17 years after our initi
LSHTM Data Compass2026 · Text · unknown
MossieGo Trial Statistical Analysis PlanStatistical analysis plan for a randomised control trial to evaluate the protective efficacy of a spatial repellent to reduce malaria prevalence in Uganda.
LSHTM Data Compass2026 · dataset · unknown
DATASET_MULTIMODAL_V8: A Nationwide Multimodal Dataset for Dengue Surveillance, Nowcasting and Forecasting in Brazil (2010–2025)DATASET_MULTIMODAL_V8 is a nationwide municipal-level multimodal dataset for dengue surveillance, nowcasting and forecasting in Brazil covering the period 2010–2025. The dataset integrates epidemiological, meteorological, precipitation, remote sensing, ENSO, topographic, land-cover, demographic and sanitation information.
LSHTM Data Compass2026 · Archive
Data for "Quantifying excess TB prevalence among people living with HIV on ART in the universal ART era: Evidence from a TB prevalence survey in Zambia and South Africa"This dataset contains variables used for the secondary analysis outlined in “Quantifying excess TB prevalence among people living with HIV on ART in the universal ART era: Evidence from a TB prevalence survey in Zambia and South Africa”. Data was collected as part of the TREATS TB prevalence survey of people living with human immunodeficiency virus (HIV) who were receiving antiretroviral therapy (
LSHTM Data Compass2026 · dataset · unknown
Complete mosquito sampling dataArboviral outbreaks are rising across Africa, a region that continues to face a substantial malaria burden. Cabo Verde remains vulnerable to the emergence and re-emergence of mosquito-borne diseases, including dengue, Zika, and malaria. In January 2024, the World Health Organization certified the country as malaria-free; however, the risk of reintroduction persists. Maintaining malaria-free status
LSHTM Data Compass2026 · dataset · unknown
ATLopezJimenez/ImageJ_macro_EdU_signal: v.1.0.0Macro to quantify Click-IT EdU signal in a bacterial mask. Used in manuscript "Proximity biotinylation at the host-bacterial interface reveals UFMylation as an antibacterial pathway". Version from Dec 2025 Serge Mostowy lab, London School of Hygiene and Tropical Medicine
LSHTM Data Compass2026 · dataset · unknown
ATLopezJimenez/ImageJ_macro_fluorescence_loss: v.1.0.0ImageJ macro for quantifying bacteria fluorescence in an enlarged bacterial mask
LSHTM Data Compass2026 · Text
Timasamala U5 dataData collected as part of a cross-sectional interferon-gamma release assay (IGRA) survey of healthy children, aged 1 to 4 years, living in 33 high-burden neighbourhoods in Blantyre, Malawi. Participants were recruited through a combination of a novel convenience sampling approach in health facilities and random household sampling guided by satellite imagery. They were subsequently tested for Mycob