Table · study · 2026
Sequential-GAM constructs the single-cell geometric 3D genome structure
Listed in NCBI GEO
The three-dimensional genome structure plays important role in cell identity and gene regulation.
Description
We used a new method to construct the diploid geometric structure of genome in single cells. Using the structure, we determine the radial positioning of distinct genomic features and epigenetic markers and the variance in single cells.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE193nnn/GSE193989 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE193989 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA798696 ncbi.nlm.nih.gov/bioproject/PRJNA798696 ↗
project · from NCBI GEO
Topics
- Stated by source
- Mus musculus · Other
- From keywords
- Life Sciences
- Inferred from text
- Genome structure and regulation 79%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE193989 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:field:310508 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (79%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |