Omics · study · 2026
Genome-wide expression changes induced by heat shock response in indigenous cattle ( Bos indicus)
Listed in NCBI GEO
Environmental heat stress negatively impacts the cattle health and productivity.
Description
It compromises the immune defense mechanisms and metabolic functions there by increasing the risk of diseases and poor productive performances. Compared to environmentally sensitive Bos taurus breeds, Bos indicus cattle breeds thrive better in tropical climates due to their heat tolerance; however, accelerating climate extremes now threaten even these resilient animals.
To explore their underlying coping mechanisms, the present study mapped genome-wide gene expression changes in the B. indicus Hariana breed during heat exposure. The results indicated activation of set of gene clusters activated under stress. The functional characterization indicated molecular networks that suggested potential heat tolerance mechanisms.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE345nnn/GSE345639 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE345639 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1518394 ncbi.nlm.nih.gov/bioproject/PRJNA1518394 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Animal production 69%
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE345639 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3003 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |