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Data · dataset · 2019

EXTENDED DATA [The conjunctival transcriptome in Ethiopians after trichiasis surgery: associations with the development of eyelid contour abnormalities and the effect of oral doxycycline treatment]

Listed in LSHTM Data Compass

Clusters of co-expressed genes in the raw read count matrix for all samples.

Description

Using a Pearson correlation cut-off of 0.88, 40 clusters were identified. Panel A shows the names of genes in each cluster.

Panel B shows the ten most enriched pathways for the genes in each cluster. Panel C shows results of differential expression testing of the cluster-sum (summed read counts of all genes in the cluster for each individual), adjusting for baseline cluster-sum expression, age and sex. Each group was compared to the reference group of Placebo-Good outcome.

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Where it is published

Catalogue records · 1

Topics

From keywords
Earth & Environmental Science · Humanities · Life Sciences · Medicine & Health · Social Science
Inferred from text
Bioinformatics and computational biology 72%
Provenance · 1 source records, 9 field assertions
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LSHTM Data Compassoai:datacompass.lshtm.ac.uk:252312 d agoJSON v1
FieldAssertionExtractorEvidence
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concepts[field].local:field:medicine-healthmapping · lshtm ac ukconnector:lshtm_ac_uk@1.0.0
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