Data · dataset · 2021
CoMix - Age structured contact matrices for 9 key periods of the COVID-19 epidemic in England
Listed in LSHTM Data Compass
Description
Contact matrices from 9 distinct periods of the UK COVID-19 epidemic: Lockdown 1 = 23rd March - 3rd June 2020; Lockdown 1 easing = 4th June - 29th July 2020; Reduced restrictions = 30th July - 3rd Sep 2020; Schools open = 4th Sept - 26th October 2020; Lockdown 2 = 5th November - 2nd December 2020; Lockdown 2 easing = 3rd December - 19th December 2020; Christmas = 20 December 2020 - 2nd January 2021; Lockdown 3 = 5th January - 8th March 2021; and Lockdown 3 with schools open = 8th March - 16th March 2021.
The file: contact_matrices_9_periods.csv contains the mean contact matrices. The nine 'qs' files for the individual periods contain 1000 bootstrap samples of the contact matrix for the relevant period. each column is a different sample. The age-groups are not explicitly detailed, but follow the same order as in the contact_matrices_9_periods.csv file.
Links
Where it is published
- DOI doi.org/10.5281/zenodo.4677018 ↗
DOI / persistent id · from lshtm ac uk
Catalogue records · 1
- OAI-PMH record datacompass.lshtm.ac.uk/cgi/oai2?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3… ↗
metadata API · from lshtm ac uk
Topics
- From keywords
- Earth & Environmental Science · Humanities · Life Sciences · Medicine & Health · Social Science
- Inferred from text
- Epidemiology 69%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| LSHTM Data Compass | oai:datacompass.lshtm.ac.uk:2171 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:group:4202 | enrichment · lshtm ac uk | taxonomy-embedding@1.0.0 | title+keywords+description (69%) |
| concepts[field].local:field:earth-environmental | mapping · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| concepts[field].local:field:humanities | mapping · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| concepts[field].local:field:social-science | mapping · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| description | source · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | /metadata/dc/description |
| publication_date | source · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| title | source · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | /metadata/dc/title |