Data · dataset · 2021
epiforecasts/epinowcast
Listed in LSHTM Data Compass
This package contains tools to enable flexible and efficient hierarchical nowcasting of right censored epidemiological counts using a semi-mechanistic Bayesian method with support for both day of reference and day of report effects.
Description
Nowcasting in this context is the estimation of the total notifications (for example hospitalisations or deaths) that will be reported for a given date based on those currently reported and the pattern of reporting for previous days.
This can be useful when tracking the spread of infectious disease in real-time as otherwise changes in trends can be obfuscated by partial reporting or their detection may be delayed due to the use of simpler methods like truncation
Links
Where it is published
- DOI doi.org/10.5281/zenodo.5637165 ↗
DOI / persistent id · from lshtm ac uk
Catalogue records · 1
- OAI-PMH record datacompass.lshtm.ac.uk/cgi/oai2?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3… ↗
metadata API · from lshtm ac uk
Topics
- From keywords
- Earth & Environmental Science · Humanities · Life Sciences · Medicine & Health · Social Science
- Inferred from text
- Disease 75% · Epidemiological modelling 78%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| LSHTM Data Compass | oai:datacompass.lshtm.ac.uk:1561 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[disease].local:disease:disease | enrichment · lshtm ac uk | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].anzsrc:field:420205 | enrichment · lshtm ac uk | taxonomy-embedding@1.0.0 | title+keywords+description (78%) |
| concepts[field].local:field:earth-environmental | mapping · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| concepts[field].local:field:humanities | mapping · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| concepts[field].local:field:social-science | mapping · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| description | source · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | /metadata/dc/description |
| publication_date | source · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| title | source · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | /metadata/dc/title |