Data · dataset · 2019
Cell intensities extracted from microscopy images for "First-principles prediction of the information processing capacity of a simple genetic circuit."
Listed in CaltechDATA
These data correspond to the single-cell mean intensity values obtained from microscopy images used to quantify fluorescence and compute gene expression distributions due to the activity of the Lac repressor molecule in E. coli cells.
Description
This information was used to compute the information processing capacity of the simple repression motif. These data are separated by the operator and repressor copy number we examined.
Please see the main text or the paper website at mrazomej.github.io/chann_cap/analysis for more information.
Links
Where it is published
- CaltechDATA record data.caltech.edu/records/g6xn0-6ng90 ↗
landing page · from data caltech edu
- DOI doi.org/10.22002/d1.1183 ↗
DOI / persistent id · from data caltech edu
Catalogue records · 1
- InvenioRDM API data.caltech.edu/api/records/g6xn0-6ng90 ↗
metadata API · from data caltech edu
Topics
- Stated by source
- gene regulation · information theory · physical biology
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Image 65% · Microscopy 75% · Structural biology 76% · Text 75%
Provenance · 1 source records, 18 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| CaltechDATA | g6xn0-6ng90 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].anzsrc:field:310112 | enrichment · data caltech edu | taxonomy-embedding@1.0.0 | title+keywords+description (76%) |
| concepts[field].local:field:earth-environmental | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:engineering | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:humanities | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:social-science | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[modality].local:modality:image | enrichment · data caltech edu | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:microscopy | enrichment · data caltech edu | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:text | enrichment · data caltech edu | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[topic].invenio_subject:data_caltech_edu:gene-regulation | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[topic].invenio_subject:data_caltech_edu:information-theory | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[topic].invenio_subject:data_caltech_edu:physical-biology | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| description | source · data caltech edu | connector:data_caltech_edu@1.0.0 | /metadata/description |
| publication_date | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| title | source · data caltech edu | connector:data_caltech_edu@1.0.0 | /metadata/title |
| updated_date | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| version_label | source · data caltech edu | connector:data_caltech_edu@1.0.0 |