Omics · study · 2026
Seed endophytic bacterium induces a priming-like drought transcriptomic state in an invasive plant prior to stress exposure
Listed in NCBI GEO
Seedborne endophytes may facilitate plant establishment by modifying host responses to environmental stress, but the mechanisms underlying these effects remain poorly understood.
Description
This may be particularly important for invasive plants, whose establishment in novel habitats often depends on tolerance to abiotic stress. Here, we examined whether the seed endophytic bacterium Erwinia tasmaniensis YJ6 induces priming-like drought-associated gene expression in the invasive plant Lactuca serriola.
We compared the growth and root transcriptomes of uninfected and YJ6-infected plants grown under benign and drought conditions. YJ6-infected plants maintained shoot dry weight, root dry weight, and relative leaf growth under drought at levels comparable to those under benign water conditions, whereas these traits decreased in uninfected plants. Under benign water conditions, YJ6 infection induced 1,114 differentially expressed genes, including 317 genes that overlapped with drought-responsive genes in uninfected plants.
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Functional enrichment analyses showed that bacterial infection under benign conditions and drought exposure in uninfected plants affected several common pathways, including plant hormone signal transduction, phenylpropanoid biosynthesis, and nitrogen metabolism. YJ6 infection also affected genes associated with ABA-related signaling, gibberellin biosynthesis, and soluble sugar metabolism. These results are consistent with the establishment of a priming-like transcriptomic state before drought exposure, providing a potential mechanism by which seedborne microbes enhance stress tolerance in invasive plants.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE281nnn/GSE281077 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE281077 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1182191 ncbi.nlm.nih.gov/bioproject/PRJNA1182191 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE281077 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |