Imaging · study · 2026
Spatial transcriptomic landscape of protein-coding genes in descended and undescended testes of dogs with unilateral cryptorchidism
Listed in NCBI GEO
Cryptorchidism is a common congenital disorder of the male reproductive system in dogs.
Description
We used the 10x Genomics Visium Spatial Gene Expression platform to profile four testicular tissue sections from two dogs with unilateral cryptorchidism: an abdominally retained testis and its contralateral descended testis, and an inguinally retained testis and its contralateral descended testis. The data reveal spot-level transcriptional differences, depletion of germ cell-associated signatures, and enrichment of Sertoli and peritubular myoid cell-associated signals in the retained testes.
Because only two dogs were studied, differential-expression results are descriptive and hypothesis-generating.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE344nnn/GSE344594 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE344594 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1516426 ncbi.nlm.nih.gov/bioproject/PRJNA1516426 ↗
project · from NCBI GEO
Topics
- Stated by source
- Other
- From keywords
- Life Sciences
- Inferred from text
- Zoology 73%
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE344594 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3109 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (73%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |