Omics · study · 2026
H3K27ac CUT&Tag profiling of kidney allograft - infiltrating and matched PBMC CD8+ T cells
Listed in NCBI GEO
Kidney allograft rejection is associated with infiltrating cytotoxic CD8+ T cells that exhibit distinct functional and transcriptional programs compared with circulating T cells in the peripheral blood.
Description
However, the epigenetic mechanisms underlying these tissue-specific effector states in human transplantation remain incompletely understood. Here, we performed H3K27ac CUT&Tag profiling on CD8+ T cells isolated from rejected human kidney allografts and matched peripheral blood mononuclear cells (PBMCs).
Comparative analyses revealed distinct H3K27ac enrichment patterns at loci associated with cytotoxic effector programs in allograft-infiltrating CD8+ T cells relative to matched circulating CD8+ T cells. These data provide a resource for dissecting epigenetic programs that shape pathogenic CD8+ T cell responses during human kidney allograft rejection.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE319nnn/GSE319298 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE319298 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1422790 ncbi.nlm.nih.gov/bioproject/PRJNA1422790 ↗
project · from NCBI GEO
Topics
- Stated by source
- Genome binding/occupancy profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE319298 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |