Data · dataset · 2026
P.falciparum genome assemblies from the GAMCC study
Listed in LSHTM Data Compass
This data accompanies the paper: Forster AJ et al, "Paralogous mutations in the Plasmodium falciparum surface anion channel associate with reduced protection due to sickle haemoglobin", to appear shortly.
Description
A preprint is available on medRxiv. Enclosed are genome assemblies of P.falciparum parasites from infections of Gambian children from the GAMCC study, sequenced as part of a trial of fragmentation processes at the Centre for Human Genetics, University of Oxford.
The two samples are `GAM958463` and `GAM249017`; both were assembled from PacBio reads generated on the SequelIIe platform. Enclosed are genome assemblies of P.falciparum parasites from infections of Gambian children from the GAMCC study, sequenced as part of a trial of fragmentation processes at the Centre for Human Genetics, University of Oxford.. The two samples are GAM958463 and GAM249017; both were assembled from PacBio reads generated on the SequelIIe platform.
Links
Where it is published
- DOI doi.org/10.5281/zenodo.21463082 ↗
DOI / persistent id · from lshtm ac uk
Catalogue records · 1
- OAI-PMH record datacompass.lshtm.ac.uk/cgi/oai2?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3… ↗
metadata API · from lshtm ac uk
Topics
- From keywords
- Earth & Environmental Science · Humanities · Life Sciences · Medicine & Health · Social Science
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| LSHTM Data Compass | oai:datacompass.lshtm.ac.uk:5324 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].local:field:earth-environmental | mapping · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| concepts[field].local:field:humanities | mapping · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| concepts[field].local:field:social-science | mapping · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| description | source · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | /metadata/dc/description |
| publication_date | source · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | |
| title | source · lshtm ac uk | connector:lshtm_ac_uk@1.0.0 | /metadata/dc/title |