Table · dataset · 2024
A data-driven estimation of the ribosome drop-off rate in S. cerevisiae reveals a correlation with the genes length.
Listed in Edmond
Ribofilio is a software package that estimates the drop-off rate of ribosomes.
Description
It is a python package that takes as a required input the reference genome and the footprint. If the mRNA reads are available, this can be used as an optional parameter for normalization.
The tool uses as well several other optional parameters like the bin size, plotting features, etc. The tool github page is: github.com/SherineAwad/Ribofilio.git
Links
Where it is published
- Dataverse dataset page edmond.mpg.de/dataset.xhtml?persistentId=doi%3A10.17617%2F3.H7OPIB ↗
landing page · from edmond mpdl mpg de
- DOI doi.org/10.17617/3.h7opib ↗
DOI / persistent id · from edmond mpdl mpg de
Catalogue records · 1
- Dataverse API edmond.mpg.de/api/datasets/:persistentId/?persistentId=doi%3A10.17617%2F3.H7… ↗
metadata API · from edmond mpdl mpg de
Topics
- Stated by source
- Biology · Biology · Computer Science, Systems and Electrical Engineering · Computer Science, Systems and Electrical Engineering · Mathematics · Mathematics · Physics · Physics
- From keywords
- Astronomy & Astrophysics · Chemistry · Computer Science & AI · Computer Science & AI · Earth & Environmental Science · Economics & Finance · Engineering · Engineering · Humanities · Life Sciences · Life Sciences · Materials Science · Mathematics & Statistics · Mathematics & Statistics · Medicine & Health · Ocean & Atmospheric Science · Physics · Physics · Social Science
- Inferred from text
- Bioinformatics and computational biology 69%
Provenance · 2 source records, 34 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Edmond | doi:10.17617/3.H7OPIB | 12 d ago | JSON v1 |
| Edmond | doi:10.17617/3.H7OPIB | 11 d ago | JSON v1 |
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