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Omics · study · 2026

Single-cell transcriptomic and immunoglobulin profiling in WT and IkB-deficient mouse early B cell progenitor and precursor populations

Listed in NCBI GEO

Aging and inflammation have been shown to reduce the supply of functional B-cells; the prevailing explanation is that hematopoietic differentiation decisions are skewed towards the myeloid lineage.

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Here, we have addressed how inflammaging may affect B-lymphopoiesis itself. Using a new NFkB reporter mouse, we uncovered dramatic dynamics in RelA control during early B lymphopoiesis in young but not in all aged mice.

When genetically perturbing NFkB RelA dynamics with specific IkB mutants, we found severe, cell-intrinsic defects in B lymphopoiesis, that could not be attributed to a differentiation block or diminished cell survival. Careful quantification of B-lymphoid progenitors allowed us to fit a mathematical model of the differentiation pathway, which led to the seemingly paradoxical prediction – confirmed in vitro – that mutant B-cell progenitors ‘rush through’ the differentiation pathway.

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Further analysis revealed that the differentiation hypermorph leads to diminished mature cell populations given that differentiation pauses are essential for population expansion. Transcriptomic profiling at single-cell resolution revealed that RelA dynamic dysregulation resulted in an accelerated progression of transcriptomic cell states that are not in synch with the classically defined progenitors and – importantly – override the preBCR checkpoint.

As this is a major quality control step to ensure proper immunoglobulin heavy chain recombination, the mutant triggers premature κ-light chain recombination, resulting in B-cells with nonfunctional immunoglobulin. Our findings establish a new paradigm for how aging and inflammation impact humoral immunity via dysregulation of RelA dynamics: accelerated differentiation diminishes the size and the quality of the B-cell pool available for adaptive immune responses.

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Life Sciences
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Genetics 68%
Provenance · 1 source records, 9 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE13796613 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].anzsrc:group:3105enrichment · NCBI GEOtaxonomy-embedding@1.1.0title+keywords+description (68%)
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[method].geo_series_type:othersource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[organism].NCBITaxon:10090source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title