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Table · dataset · 2026

Physicochemical properties of syringic acid-adsorbed XZn<sub>11</sub>O<sub>12</sub> (X = Zn, Ti, Ni, Zr) nanocages and binding interactions with aureusimine biosynthetic cluster reductase domain

Listed in ZivaHub and Deakin Research Online and DMU Figshare — shown once because both records carry DOI 10.6084/m9.figshare.34036934.v1

Description

<p>This study examined the physicochemical features of syringic acid (SA) adsorption on metal-incorporated zinc oxide nanocages (SA@XZn<sub>11</sub>O<sub>12</sub>, X = Zn, Ti, Ni and Zr) using density functional theory, and their binding interactions with the aureusimine biosynthetic cluster reductase domain (AusA) using molecular docking. The adsorption of SA on XZn<sub>11</sub>O<sub>12</sub> nanocages significantly modifies their quantum mechanical properties and enhances their binding affinity towards AusA, a target enzyme of <i>S. aureus</i>.

SA@ZrZn<sub>11</sub>O<sub>12</sub> exhibited the most favourable binding characteristics, with an adsorption energy of −38<i>.</i>39 kcal/mol, a dipole moment of 7.69 Debye and an energy gap of 0.52 eV using B3LYP/LANL2DZ calculations in the gas phase, which were further evaluated in the water phase and with the WB97XD functional. Global reactivity descriptors, UV–visible spectral analysis, non-covalent interactions and optical properties also supported the superior electronic characteristics of the Zr-doped complex.

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Molecular docking revealed that SA@ZrZn<sub>11</sub>O<sub>12</sub> binds favourably to the active site of AusA, with a docking score of −5<i>.</i>50 kcal/mol. The overall analysis indicates that SA@ZrZn<sub>11</sub>O<sub>12</sub> may serve as a promising candidate among the investigated complexes, providing valuable insights into the rational design of a novel antibacterial agent against <i>S. aureus</i>. Nevertheless, experimental studies are needed to validate these computational findings.</p>

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Catalogue records · 1

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Provenance · 3 source records, 24 field assertions
SourceKeyLast seenRaw
ZivaHuboai:figshare.com:article/340369344 d agoJSON v1
Deakin Research Onlineoai:figshare.com:article/340369344 d agoJSON v1
DMU Figshareoai:figshare.com:article/340369344 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].anzsrc:field:340404enrichment · zivahub uct ac zataxonomy-embedding@1.1.0title+keywords+description (76%)
concepts[field].local:field:astronomymapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
concepts[field].local:field:astronomymapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:astronomymapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
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concepts[field].local:field:life-sciencesmapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
concepts[field].local:field:life-sciencesmapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
concepts[field].local:field:medicine-healthmapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
concepts[field].local:field:medicine-healthmapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:medicine-healthmapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
concepts[method].local:method:dftmapping · figshare dmu ac ukvocabulary-mapper@1.0.0keywords['density functional theory']
concepts[method].local:method:dftmapping · zivahub uct ac zavocabulary-mapper@1.0.0keywords['density functional theory']
concepts[method].local:method:dftmapping · dro deakin edu auvocabulary-mapper@1.0.0keywords['density functional theory']
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