Omics · study · 2026
A Long-lived Avatar for Modeling Age-Related Vascular Disease [scRNAseq]
Listed in NCBI GEO
Current microphysiological models do not support long-term investigations into the chronic effects of vascular risk factors and the development of vascular diseases.
Description
Prolonged culture frequently leads to cellular senescence and loss of functional integrity, resulting in variability and inconsistency in modeling chronic vascular responses. Here the aim of this study was to develop and sustain a long-term multicellular human vascular avatar, addressing the critical need for long-term disease modeling and drug testing.
Guided by quantitative morphological analyses and bulk RNAseq profiling, a novel optimized culture media containing factors that enhance the long-term health of vascular cells was generated. Subsequently, a human vascular avatar with a three-dimensional extracellular matrix environment and 3D vascular architecture for over 180 days using an organ-on-chip (Vessel-Chip) model was engineered, maintained and characterized.
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Finally, this long-lived human vascular avatar provides a powerful platform to model vascular aging using iPSC-derived vascular cells from patients with Hutchinson-Gilford Progeria Syndrome (HGPS).
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE346nnn/GSE346533 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE346533 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1525695 ncbi.nlm.nih.gov/bioproject/PRJNA1525695 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Disease 75% · RNA sequencing 65%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE346533 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |