Table · dataset · 2024
tattabio/OMG_prot50
Listed in Hugging Face Datasets
OMG_prot50: An Open MetaGenomic Protein Dataset The OMG_prot50 dataset is a protein-only dataset, created by clustering the Open MetaGenomic dataset (OMG) at 50% sequence identity.
Description
MMseqs2 linclust (Steinegger and Söding 2018) was used to cluster all 4.2B protein sequences from the OMG dataset, resulting in 207M protein sequences. Sequences were clustered at 50% sequence id and 90% sequence coverage, and singleton clusters were removed.
See github.com/TattaBio/OMG for… See the full description on the dataset page: huggingface.co/datasets/tattabio/OMG_prot50.
Links
Where it is published
- Hugging Face dataset page huggingface.co/datasets/tattabio/OMG_prot50 ↗
landing page · from Hugging Face
Catalogue records · 1
- Hub API huggingface.co/api/datasets/tattabio/OMG_prot50 ↗
metadata API · from Hugging Face
Topics
- Stated by source
- text
- From keywords
- Computer Science & AI
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Hugging Face Datasets | tattabio/OMG_prot50 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · Hugging Face | connector:huggingface@1.0.0 | /gated |
| concepts[field].local:field:computer-science-ai | mapping · Hugging Face | connector:huggingface@1.0.0 | |
| concepts[modality].hf_modality:text | source · Hugging Face | connector:huggingface@1.0.0 | |
| created_date | source · Hugging Face | connector:huggingface@1.0.0 | |
| description | source · Hugging Face | connector:huggingface@1.0.0 | /description |
| license | source · Hugging Face | connector:huggingface@1.0.0 | /tags[license:*] |
| publication_date | source · Hugging Face | connector:huggingface@1.0.0 | |
| title | source · Hugging Face | connector:huggingface@1.0.0 | /id |
| updated_date | source · Hugging Face | connector:huggingface@1.0.0 |