Excel · study · 2026
Rapamycin, but not propranolol, can partially revert CCM phenotype in brain endothelial cells and ameliorates chronic cavernoma development in combination with lapatinib
Listed in NCBI GEO
Brain microvascular endothelial cells (mBMEC) deficient in Ccm3 were used to model CCMs in vitro.
Description
Cells were treated with propranolol (10 µM) and rapamycin (100 nM) for various durations. RNAseq was employed to analyze gene expression.
Propranolol did not significantly affect the CCM phenotype in mBMEC, failing to revert gene expression changes. Rapamycin partially reversed gene expression changes caused by Ccm3 deficiency, affecting genes such as Nos3, Adamts1, and Thbs1, known to be important for cavernoma pathogenesis in endothelial cells deficient for Ccm3. Propranolol's lack of efficacy in brain endothelial cells raises questions about its mechanism of action and potential benefits in CCM treatment.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE298nnn/GSE298723 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE298723 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1271011 ncbi.nlm.nih.gov/bioproject/PRJNA1271011 ↗
project · from NCBI GEO
- PubMed 42427156 pubmed.ncbi.nlm.nih.gov/42427156 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE298723 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |