Omics · study · 2026
Colon and small intestine (lamina propria) T cells in pregnancy and SFB infection [I37]
Listed in NCBI GEO
This study is part of the immgenT Open Source Project, specifically from IGT37, which focuses on characterizing T cells from the lamina propria of the colon and ileum during pregnancy and postpartum states in mice infected by SFB.
Description
T cells (CD45+ CD3e+) were isolated from the lamina propria of the colon and ileum of female C57BL/6J mice at multiple reproductive stages: virgin (estrus or proestrus), early pregnancy (E6.5), mid-pregnancy (E12.5), late pregnancy (E18.5), and 30 days postpartum (30dpp).
All C57BL/6J mice were infected by segmented filamentous bacteria (SFB) by cohousing with Taconic mice for two weeks before timed mating.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE347nnn/GSE347793 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE347793 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1531183 ncbi.nlm.nih.gov/bioproject/PRJNA1531183 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus · Other
- From keywords
- Life Sciences
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE347793 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |