Omics · study · 2026
Pichinde virus models intrauterine infection by hemorrhagic fever-causing arenaviruses
Listed in NCBI GEO
Arenaviruses infection during pregnancy can cause severe maternal disease, congenital infection, and/or fetal demise.
Description
Little is known about the pathogenesis of this family of viruses in the placenta because many are endemic in resource-poor regions and must be studied in high containment laboratories. Pichinde virus (PICV) is a nonpathogenic arenavirus that causes hemorrhagic fever-like disease in guinea pigs.
In this study, we sought to assess whether PICV replicates in human trophoblasts and how infection affected pregnant guinea pigs. RNA-sequencing was done on PICV-infected human trophoblast stem cells and samples of placenta and decidua collected from infected and control pregnant guinea pigs.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE329nnn/GSE329765 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329765 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1461456 ncbi.nlm.nih.gov/bioproject/PRJNA1461456 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Disease 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE329765 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |