Omics · study · 2026
ADNP regulates chromatin architecture and lineage fidelity during neural differentiation
Listed in NCBI GEO
Activity-dependent neuroprotective protein (ADNP) is frequently mutated in autism spectrum disorder and causal in its namesake neurodevelopmental syndrome.
Description
In mouse embryonic stem cells (mESCs), ADNP forms the ChAHP complex to function in gene regulation as well as genome organization, where it competes with binding of the architectural protein CTCF. However, it is unclear whether these functions persist in differentiated cells.
To shed light on this question, we have established an ADNP-degron cell line to examine CTCF binding, gene expression and chromatin organization upon ADNP loss in neural progenitor cells (NPCs).
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE303nnn/GSE303981 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE303981 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1298356 ncbi.nlm.nih.gov/bioproject/PRJNA1298356 ↗
project · from NCBI GEO
- PubMed 41920822 pubmed.ncbi.nlm.nih.gov/41920822 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Genome binding/occupancy profiling by high throughput sequencing · Mus musculus · Other
- From keywords
- Life Sciences
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE303981 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |