Omics · study · 2026
Genomic architecture of the developing forelegs of Drosophila prolongata; an exaggerated weapon and ornament
Listed in NCBI GEO
Elaborate secondary sexual traits are among the most striking phenotypes in nature.
Description
Functional genetic studies of these phenotypes generally focus on within-species analyses of candidate signalling pathways. These provide insight into mechanisms of trait expression, but not necessarily genetic differences contributing to evolutionary change.
Drosophila prolongata offers an exceptional model to explore the evolution of trait exaggeration, as the only known species with male-specific foreleg size exaggeration in the melanogaster species group. We used sex-specific RNA-seq in fore- and midleg developing organs (imaginal discs) sampled at both the onset, and just after initiation of, sexually dimorphic growth between these tissues in D. prolongata. We sampled equivalent developmental tissues & stages in D. carrolli (~4MYA divergence) and D. melanogaster (~35MYA).
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We observed a positive relationship between number, but not magnitude of differential expressed, sex-biased genes, with the extent of adult phenotypic dimorphism. RNAi knockdown in D. melanogaster, of the gene grain, caused D. prolongata-like leg phenotypes. We found modest changes to magnitude and direction of expression differences in signalling pathways previously implicated in sexually dimorphic evolution in other species.
Our results are consistent with the evolution of sex-specific phenotypes being jointly mediated by few genes with large, and many more genes with modest impacts on sex-biased gene expression.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE330nnn/GSE330706 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE330706 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1465287 ncbi.nlm.nih.gov/bioproject/PRJNA1465287 ↗
project · from NCBI GEO
- PubMed 42172094 pubmed.ncbi.nlm.nih.gov/42172094 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Drosophila melanogaster · Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Evolutionary biology 72% · RNA sequencing 65%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE330706 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3104 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (72%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:7227 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |