Data · dataset · 2025
Research data supporting "Intracrine FFA4 Signaling Controls Lipolysis at Lipid Droplets"
Listed in UBIRA eData
This repository contains HILO microscopy images of either differentiated immortalized mouse brown preadipocytes or differentiated 3T3-L1 cells, as indicated in each image file name.
Description
Cells were transiently transfected with either YFP-tagged free fatty acid receptor 4 (FFA4) or Halo-tagged β2-adrenergic receptor (B2AR), labelled with JF646. These fluorescently tagged receptors were used to train a machine learning–based pixel classifier in Ilastik to categorize receptor pixels as either plasma membrane or intracellular.
In some images, cells were also co-transfected with mini-G protein probes, which translocate from the cytoplasm to active receptors upon stimulation. MATLAB was used to quantify mini-G translocation to FFA4 or B2AR at both the plasma membrane and intracellular membranes. Each file name includes, in order: the corresponding figure, cell line, transfected overexpressed proteins, laser excitation wavelength, stimulant used, and cell number.
Links
Where it is published
- UBIRA eData record edata.bham.ac.uk/1316/2/Images_analysed.zip ↗
landing page · from edata bham ac uk
- UBIRA eData record edata.bham.ac.uk/1316/1/Images_timecourse.zip ↗
landing page · from edata bham ac uk
- DOI doi.org/10.25500/edata.bham.00001316 ↗
DOI / persistent id · from edata bham ac uk
Catalogue records · 1
- OAI-PMH record edata.bham.ac.uk/cgi/oai2?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3… ↗
metadata API · from edata bham ac uk
Topics
- From keywords
- Earth & Environmental Science
- Inferred from text
- Image 75% · Microscopy 75%
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| UBIRA eData | oai:edata.bham.ac.uk:1316 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].local:field:earth-environmental | mapping · edata bham ac uk | connector:edata_bham_ac_uk@1.0.0 | |
| concepts[modality].local:modality:image | enrichment · edata bham ac uk | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:microscopy | enrichment · edata bham ac uk | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · edata bham ac uk | connector:edata_bham_ac_uk@1.0.0 | /metadata/dc/description |
| license_text | source · edata bham ac uk | connector:edata_bham_ac_uk@1.0.0 | |
| publication_date | source · edata bham ac uk | connector:edata_bham_ac_uk@1.0.0 | |
| title | source · edata bham ac uk | connector:edata_bham_ac_uk@1.0.0 | /metadata/dc/title |