Data · dataset · 2024
Picoplankton 16S rRNA gene sequences (DNA and RNA) from Vertical Profiles (surface to 4000m depth) sampled during the Malaspina 2010 circumglobal expedition
Listed in GBIF
The study here includes 182 samples (91 DNA and 91 RNA) of the 16S from the Malaspina-2010 expedition.
Description
The samples were sequenced using Illumina MiSeq 2x250bp.
Links
Get the data
- Darwin Core Archive hosted-datasets.gbif.org/mgnify/MGYS00006660.zip ↗
download · from gbif
Where it is published
- GBIF dataset page gbif.org/dataset/c6109423-bd9e-45ec-a8ee-fad0edc8a60f ↗
landing page · from gbif
- DOI doi.org/10.15468/yyd7cm ↗
DOI / persistent id · from gbif
Documentation and papers
- Publisher page ebi.ac.uk/metagenomics/studies/MGYS00006660 ↗
documentation · from gbif
Catalogue records · 1
- GBIF API api.gbif.org/v1/dataset/c6109423-bd9e-45ec-a8ee-fad0edc8a60f ↗
metadata API · from gbif
Topics
- From keywords
- Life Sciences
- Inferred from text
- Bioinformatics and computational biology 72%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| GBIF | c6109423-bd9e-45ec-a8ee-fad0edc8a60f | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · gbif | connector:gbif@1.0.0 | |
| concepts[field].anzsrc:group:3102 | enrichment · gbif | taxonomy-embedding@1.1.0 | title+keywords+description (72%) |
| concepts[field].local:field:life-sciences | mapping · gbif | connector:gbif@1.0.0 | |
| created_date | source · gbif | connector:gbif@1.0.0 | |
| description | source · gbif | connector:gbif@1.0.0 | /description |
| license | source · gbif | connector:gbif@1.0.0 | |
| publication_date | source · gbif | connector:gbif@1.0.0 | |
| title | source · gbif | connector:gbif@1.0.0 | /title |
| updated_date | source · gbif | connector:gbif@1.0.0 |