Omics · study · 2026
Immunization by mobile virus-derived siRNAs is crucial for plant antiviral silencing
Listed in NCBI GEO
The movement of virus-derived (v)siRNAs between plant cells has prompted the widely held assumption that they help immunize as-yet-uninfected tissues.
Description
Ascertaining this role is challenging because it requires uncoupling vsiRNA mobility from viral movement while preserving viral virulence. Consequently, the contribution of non-cell-autonomous RNAi to plant antiviral immunity remains essentially unknown.
Here, we investigated the naturally phloem-restricted infection of turnip yellows virus (TuYV) in the stereotypical Arabidopsis root system at cellular resolution. We uncovered intertwined, complex mechanisms operating in both vsiRNA-emitting and -recipient cells, that drive reiterated short-range (~3-4 cell) immunization events. We found that, while intracellular antiviral RNAi is nullified by TuYV, non-cell-autonomous immunization accounts mainly —if not exclusively— for the containment of viral tissue invasion, titers and symptoms severity at the whole-plant scale.
Read the rest (1 more)
Mobile vsiRNA-mediated immunization likewise spatially confines a TuYV unrelated virus over ~3-4 cells, uncovering a generic, essential, yet previously unexplored component of plant antiviral defence.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE316nnn/GSE316637 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE316637 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1403521 ncbi.nlm.nih.gov/bioproject/PRJNA1403521 ↗
project · from NCBI GEO
Topics
- Stated by source
- Arabidopsis thaliana · Expression profiling by high throughput sequencing · Non-coding RNA profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Agricultural biotechnology 69%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE316637 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3001 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].geo_series_type:non-coding-rna-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:3702 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |