Table · dataset · 2026
Field bioremediation trial data and identifiability analysis code for petroleum-contaminated soil, Kyzylorda region, Kazakhstan
Listed in figshare and Loughborough Research Repository and GRANTS Data and UP Research Data Repository — shown once because both records carry DOI 10.6084/m9.figshare.33514384.v1
Description
<p dir="ltr">This deposit contains the raw field data and the complete analysis code behind the study of kinetic model identifiability in field-scale bioremediation of petroleum-contaminated soil.</p><p dir="ltr">The field trial was carried out between April and June 2026 at an oil-waste treatment site in the Kyzylorda region, Kazakhstan (45°42′ N, 65°28′ E). Six plots of 2 × 2 m, each holding 200 kg of soil, received one of the following treatments: an untreated control with no oil; oil with no further treatment; oil with mineral fertiliser; oil with fertiliser and reintroduced indigenous degrading strains; oil with fertiliser and a biopreparation based on the same strains; and oil with biochar.
Samples were taken on days 0, 13, 27, 41, 55, 69 and 83 and analysed for total petroleum hydrocarbons, pH, mineralisation, moisture, available nitrogen, phosphorus and potassium, and organic carbon. Air temperature was recorded on site at each sampling date.</p><p dir="ltr">The code fits six kinetic models to these data — zero order, first order, two-compartment, substrate Monod, Haldane and first order with multiplicative nitrogen limitation — and assesses the identifiability of their parameters through standard errors and residual sum-of-squares profiles.
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A separate Monte Carlo script establishes the degradation depth, number of sampling points and number of contaminant loading levels required for each model class to be identified.</p><p dir="ltr">Contents: field_data.csv (raw monitoring data); kinetic_analysis.py and numerical_experiment.py (analysis code); results_kinetic_parameters.csv, results_model_comparison.csv, results_profile_likelihood.csv, results_KN_series_length.csv and results_specific_rates.csv (computed results).
README.md documents the treatments, methods and how to reproduce the output. Running the two scripts reproduces Tables 1–8 of the associated article.</p><p dir="ltr">The field design includes no replication, so differences between treatments are reported as trends rather than confirmed effects. The control plot carried residual contamination from earlier operations and is excluded from the kinetic analysis.
Both points are documented in the README.</p><p dir="ltr">Requires Python 3.11 with numpy, scipy and pandas. Released under CC BY 4.0.</p>
Links
Where it is published
- DOI doi.org/10.6084/m9.figshare.33514384.v1 ↗
DOI / persistent id · from figshare com
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from figshare com
Topics
- From keywords
- Astronomy & Astrophysics · Bioremediation · Bioremediation · Bioremediation · Bioremediation · Chemistry · Chemistry · Computer Science & AI · Computer Science & AI · Earth & Environmental Science · Earth & Environmental Science · Earth & Environmental Science · Earth & Environmental Science · Economics & Finance · Economics & Finance · Energy · Energy · Energy · Energy · Engineering · Engineering · Engineering · Humanities · Humanities · Humanities · Life Sciences · Life Sciences · Life Sciences · Materials Science · Mathematics & Statistics · Medicine & Health · Medicine & Health · Ocean & Atmospheric Science · Psychology & Behavioral Science · Social Science · Social Science · Social Science
Provenance · 4 source records, 42 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| figshare | oai:figshare.com:article/33514384 | 4 d ago | JSON v1 |
| Loughborough Research Repository | oai:figshare.com:article/33514384 | 3 d ago | JSON v1 |
| GRANTS Data | oai:figshare.com:article/33514384 | 3 d ago | JSON v1 |
| UP Research Data Repository | oai:figshare.com:article/33514384 | 3 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].anzsrc:field:410303 | mapping · repository lboro ac uk | vocabulary-mapper@1.0.0 | keywords['Bioremediation'] |
| concepts[field].anzsrc:field:410303 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Bioremediation'] |
| concepts[field].anzsrc:field:410303 | mapping · grantsdata jst go jp | vocabulary-mapper@1.0.0 | keywords['Bioremediation'] |
| concepts[field].anzsrc:field:410303 | mapping · researchdata up ac za | vocabulary-mapper@1.0.0 | keywords['Bioremediation'] |
| concepts[field].local:field:astronomy | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:computer-science-ai | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:computer-science-ai | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · grantsdata jst go jp | connector:grantsdata_jst_go_jp@1.0.0 | |
| concepts[field].local:field:economics-finance | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:economics-finance | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:energy | mapping · grantsdata jst go jp | connector:grantsdata_jst_go_jp@1.0.0 | |
| concepts[field].local:field:energy | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:energy | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:energy | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:engineering | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:engineering | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:engineering | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:humanities | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:humanities | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:humanities | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:materials-science | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:mathematics-statistics | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:ocean-atmospheric | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:psychology-behavioral | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:social-science | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:social-science | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:social-science | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| description | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/description |
| license | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/rights |
| publication_date | source · figshare com | connector:figshare_com@1.0.0 | |
| title | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/title |