Data · study · 2026
Metadomain genome associations in mammalian T cells
Listed in NCBI GEO
We identified megabase-scale and inter-chromosomal interactions, including many cell type-specific meta-TAD associations (meta-domains) containing genes important for T cell function including Ctla4, Ikzf2, Ets1, Lef1, Runx1, Bach2, Foxo1 and others.
Description
Reanalysis of published data confirmed the reproducibility of these metadomain interactions in both mouse and human T cells.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE276nnn/GSE276057 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE276057 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1154607 ncbi.nlm.nih.gov/bioproject/PRJNA1154607 ↗
project · from NCBI GEO
- PubMed 42105235 pubmed.ncbi.nlm.nih.gov/42105235 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Mus musculus · Other
- From keywords
- Life Sciences
- Inferred from text
- Genetics 70%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE276057 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3105 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (70%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |