Omics · study · 2026
Adaptive immunity shapes baseline pImmunity Shapes Baseline Physiology of M. Tuberculosistuberculosis in High-Dose Versus Low-Dose I in high-dose versus low-dose infection BALB/c mouse drug treatment mMouse Drug Treatment Models
Listed in NCBI GEO
Around day 16 of infection with Mycobacterium tuberculosis (Mtb), the BALB/c mouse adaptive immunity activates to combat the infection.
Description
Usual dual RNA-seq, we investigated the transcriptional changes that occur in both mouse host and Mtb pathogen during an untreated low dose aerosol (LDA) infection—focusing on the transition from innate to adaptive immunity. We found that the onset of adaptive immunity coincided with a rapid reprogramming of Mtb physiology, characterized by suppressed respiration, metabolism, and biosynthesis, together with induction of stress and nutrient acquisition pathways.
Changes in key Mtb processes were concordant with changes in host expression of canonical features of adaptive immunity.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE324nnn/GSE324037 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE324037 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1433259 ncbi.nlm.nih.gov/bioproject/PRJNA1433259 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE324037 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |