Omics · study · 2026
hY3 RNA binds and inhibits Ribosomes and modulates the Starvation-induced Integrated Stress Response
Listed in NCBI GEO
Cells adapt to metabolic stress by orchestrating gene expression to mitigate cellular damage, sustain homeostasis, and promote survival.
Description
Within this framework, translational control provides a rapid and efficient layer of regulation. Non-coding RNAs have recently emerged as effective modulators of translation, partly by targeting the ribosome.
The contribution of ribosome-associated non-coding RNAs (rancRNAs) to translation regulation, however, remains largely unexplored in human cells. Here, we identify the human Y3 RNA (hY3) as a rancRNA that inhibits protein synthesis and attenuates cellular metabolism. hY3 function is particularly critical under nutrient deprivation, where it promotes adaptive stress responses. In this context, depletion of hY3 disrupts the delicate balance between survival and apoptosis by reducing the expression of pro-survival factors and impairing activation of the integrated stress response (ISR).
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Loss of hY3 reduces starvation-dependent phosphorylation of eIF2α, thereby attenuating ISR signaling which results in non-physiologically elevated global translation rates during nutrient deprivation. Together, our findings establish hY3 as a regulator of translation and stress responses, positioning it as a determinant of cell fate under metabolic stress.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE309nnn/GSE309059 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE309059 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1333871 ncbi.nlm.nih.gov/bioproject/PRJNA1333871 ↗
project · from NCBI GEO
- PubMed 42635123 pubmed.ncbi.nlm.nih.gov/42635123 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Homo sapiens · Non-coding RNA profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Biochemistry and cell biology 70%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE309059 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3101 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (70%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:non-coding-rna-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |