Omics · study · 2026
Intraepithelial T cells in intestine segments [I30]
Listed in NCBI GEO
This study is part of the immgenT Open Source Project, specifically from IGT30, which focuses on characterizing intraepithelial T cells across distinct intestinal segments: duodenal epithelium, jejunal epithelium, ileal epithelium, and colonic epithelium of wild-type C57BL/6J mice (8 weeks old, both male and female).
Description
The dataset comprises single-cell profiles of T cells isolated from the spleen, duodenal epithelium, jejunal epithelium, ileal epithelium, and colonic epithelium of wild-type C57BL/6J mice (8 weeks old, both male and female).
It also includes a spleen control at baseline (6-8-week-old C57BL/6J mouse).
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE347nnn/GSE347606 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE347606 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1530575 ncbi.nlm.nih.gov/bioproject/PRJNA1530575 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus · Other
- From keywords
- Life Sciences
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE347606 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |