Single-cell RNA-seq and ATAC-seq data matrices of hepatocellular carcinoma and adjacent non-tumor tissues

This dataset provides the processed single-cell RNA-seq and single-cell ATAC-seq matrices of hepatocellular carcinoma (HCC) tissues and paired adjacent non-tumor liver tissues, generated for our study on HCC.The dataset contains two archives:scRNAupfile.zip: per-sample folders with the standard output trio — matrix.mtx.gz (sparse count matrix, rows = genes, columns = cells), features.tsv.gz (gene names), and barcodes.tsv.gz (cell barcodes).scATACupfile.zip: per-sample chromatin accessibility data, including fragments files in BGZF format with tabix indices.