Omics · dataset · 2015
RNA-Seq read counts from monocyte- and ips-derived macrophages
Listed in Zenodo
This file contains raw RNA-Seq read counts from monocyte-derived macrophages (MDMs) and induced pluripotent stem cell-derived macrophages (IPSDMs) before and after 6 hours stimulation after LPS.
Description
The file was created using featureCounts. The first two columns are: gene_id: Ensembl 74 gene id. length: Length of the gene in bp.
The MDM samples are: B1_ctrl B1_LPS B4_ctrl B4_LPS B5_ctrl B5_LPS B2_ctrl B2_LPS B3_ctrl B3_LPS The IPSDM samples are: CRL1_ctrl CRL1_LPS S7RE_ctrl S7RE_LPS FSPS10C_ctrl FSPS10C_LPS FSPS11B_ctrl FSPS11B_LPS
Links
Get the data
Where it is published
- Zenodo record zenodo.org/records/16739 ↗
landing page · from Zenodo
- DOI doi.org/10.5281/zenodo.16739 ↗
DOI / persistent id · from Zenodo
Catalogue records · 1
- Zenodo API zenodo.org/api/records/16739 ↗
metadata API · from Zenodo
Topics
- From keywords
- RNA sequencing
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Zenodo | 16739 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · Zenodo | connector:zenodo@1.0.0 | /metadata/access_right |
| byte_size | source · Zenodo | connector:zenodo@1.0.0 | |
| concepts[modality].local:modality:rna-seq | mapping · Zenodo | vocabulary-mapper@1.0.0 | keywords['RNA-Seq'] |
| created_date | source · Zenodo | connector:zenodo@1.0.0 | |
| description | source · Zenodo | connector:zenodo@1.0.0 | /metadata/description |
| license | source · Zenodo | connector:zenodo@1.0.0 | /metadata/license |
| publication_date | source · Zenodo | connector:zenodo@1.0.0 | |
| title | source · Zenodo | connector:zenodo@1.0.0 | /metadata/title |
| updated_date | source · Zenodo | connector:zenodo@1.0.0 |