Omics · study · 2026
The transcriptome of highly aneuploid senescent cells reveals interaction with the tumor microenvironment and a pro-survival role of Yorkie
Listed in NCBI GEO
Chromosomal instability (CIN), an increased rate of changes in chromosome structure and number, is observed in most human carcinomas.
Description
Drosophila epithelial tumor models have been instrumental in demonstrating that, beyond the generation of genomic copy number heterogeneity, CIN can act as a source of tumor growth, metastasis and malignancy through the production of aneuploidy-induced senescent cells. Here we characterized the transcriptional program of these cells.
We present evidence that most cellular responses to aneuploidy and senescence, such as cell cycle arrest, autophagy induction, activation of the actin cytoskeleton and upregulation of genes involved in secretion, are reflected at the transcriptional level. Besides those secreted proteins mediating tumor growth, metastasis and malignancy, we unravel a role of Upd1 cytokine in driving the death of the nearby tumor microenvironment through activation of the JAK/STAT pathway and induction of autophagy.
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We also demonstrate a pro-survival role of the hippo-Yorkie pathway in tumor cells. Our data contribute to the identification of potential therapeutic strategies to block CIN-induced tumorigenesis by targeting senescent cells and blocking their ability to interact with the tumor microenvironment.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE306nnn/GSE306996 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE306996 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1314096 ncbi.nlm.nih.gov/bioproject/PRJNA1314096 ↗
project · from NCBI GEO
- PubMed 42249189 pubmed.ncbi.nlm.nih.gov/42249189 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Drosophila melanogaster · Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE306996 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[field].anzsrc:group:3105 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (73%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:7227 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |