Table · dataset · 2026
Table 1_Transcriptomic evidence of an IFN-gamma-associated inflammatory state in active visceral leishmaniasis: an exploratory comparison with pediatric HLH.docx
Listed in ZivaHub and Deakin Research Online and DMU Figshare and HKU DataHub and Swinburne Figshare and DaYta Ya Rona and SUNScholarData and figshare and Loughborough Research Repository and GRANTS Data and UP Research Data Repository — shown once because both records carry DOI 10.3389/fcimb.2026.1924856.s004
Description
Background<p>Visceral leishmaniasis (VL) can progress to secondary hemophagocytic lymphohistiocytosis (HLH), but transcriptomic similarities between active VL and pediatric HLH remain uncertain.</p>Methods<p>We integrated VL whole-blood expression data (GSE125992), sorted CD68-positive monocyte bulk-expression data from pediatric HLH and severe sepsis (GSE150707), and supportive Leishmania-infected mouse spleen single-cell data (GSE240385).
Differential expression, pathway enrichment, an exploratory 132-gene HLH-versus-sepsis-derived ssGSEA score, FARDEEP-LM22 deconvolution, signature-excluded WGCNA, CellChat, and a refitted three-gene classifier were evaluated.</p>Results<p>Active VL showed IFN-gamma-associated expression changes, including higher CXCL9 and CXCL10. The exploratory 132-gene score was higher in ActiveCase than EHC samples (Mann-Whitney P = 0.000637).
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Across 22 deconvolved cell types, only M1 macrophages showed an FDR-supported positive correlation with this score (rho = 0.787, BH q = 0.000503). After all 132 score genes were excluded before network construction, a 124-gene magenta module remained associated with the score (rho = 0.837, BH q = 4.29 × 10^-5). A refitted IFNG/GBP5/MX2 classifier achieved a same-study validation AUC of 0.917 (bootstrap 95% CI 0.733-1.000), but the validation set contained only 16 samples.</p>Conclusion<p>These public datasets support an IFN-gamma-associated inflammatory state in active VL and exploratory cross-compartment convergence with pediatric HLH.
The 132-gene score, deconvolution, network, and classifier results are hypothesis-generating and do not establish HLH specificity, cellular causality, independent external validity, or clinical HLH prediction.</p>
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Where it is published
- DOI doi.org/10.3389/fcimb.2026.1924856.s004 ↗
DOI / persistent id · from zivahub uct ac za
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from zivahub uct ac za
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Related
Provenance · 11 source records, 77 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ZivaHub | oai:figshare.com:article/34038195 | 13 d ago | JSON v1 |
| Deakin Research Online | oai:figshare.com:article/34038195 | 13 d ago | JSON v1 |
| DMU Figshare | oai:figshare.com:article/34038195 | 13 d ago | JSON v1 |
| HKU DataHub | oai:figshare.com:article/34038195 | 13 d ago | JSON v1 |
| Swinburne Figshare | oai:figshare.com:article/34038195 | 13 d ago | JSON v1 |
| DaYta Ya Rona | oai:figshare.com:article/34038195 | 13 d ago | JSON v1 |
| SUNScholarData | oai:figshare.com:article/34038195 | 13 d ago | JSON v1 |
| figshare | oai:figshare.com:article/34038195 | 12 d ago | JSON v1 |
| Loughborough Research Repository | oai:figshare.com:article/34038195 | 12 d ago | JSON v1 |
| GRANTS Data | oai:figshare.com:article/34038195 | 12 d ago | JSON v1 |
| UP Research Data Repository | oai:figshare.com:article/34038195 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].anzsrc:field:320203 | mapping · datahub hku hk | vocabulary-mapper@1.0.0 | keywords['Clinical Microbiology'] |
| concepts[field].anzsrc:field:320203 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Clinical Microbiology'] |
| concepts[field].anzsrc:field:320203 | mapping · figshare swinburne edu au | vocabulary-mapper@1.0.0 | keywords['Clinical Microbiology'] |
| concepts[field].anzsrc:field:320203 | mapping · dayta nwu ac za | vocabulary-mapper@1.0.0 | keywords['Clinical Microbiology'] |
| concepts[field].anzsrc:field:320203 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Clinical Microbiology'] |
| concepts[field].anzsrc:field:320203 | mapping · scholardata sun ac za | vocabulary-mapper@1.0.0 | keywords['Clinical Microbiology'] |
| concepts[field].anzsrc:field:320203 | mapping · grantsdata jst go jp | vocabulary-mapper@1.0.0 | keywords['Clinical Microbiology'] |
| concepts[field].anzsrc:field:320203 | mapping · dro deakin edu au | vocabulary-mapper@1.0.0 | keywords['Clinical Microbiology'] |
| concepts[field].anzsrc:field:320203 | mapping · researchdata up ac za | vocabulary-mapper@1.0.0 | keywords['Clinical Microbiology'] |
| concepts[field].anzsrc:field:320203 | mapping · figshare dmu ac uk | vocabulary-mapper@1.0.0 | keywords['Clinical Microbiology'] |
| concepts[field].anzsrc:field:320203 | mapping · repository lboro ac uk | vocabulary-mapper@1.0.0 | keywords['Clinical Microbiology'] |
| concepts[field].local:field:astronomy | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · scholardata sun ac za | connector:scholardata_sun_ac_za@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:computer-science-ai | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:computer-science-ai | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · figshare dmu ac uk | connector:figshare_dmu_ac_uk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · datahub hku hk | connector:datahub_hku_hk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · figshare swinburne edu au | connector:figshare_swinburne_edu_au@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · dayta nwu ac za | connector:dayta_nwu_ac_za@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · scholardata sun ac za | connector:scholardata_sun_ac_za@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · grantsdata jst go jp | connector:grantsdata_jst_go_jp@1.0.0 | |
| concepts[field].local:field:economics-finance | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:economics-finance | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:engineering | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:engineering | mapping · dayta nwu ac za | connector:dayta_nwu_ac_za@1.0.0 | |
| concepts[field].local:field:engineering | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:engineering | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:humanities | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:humanities | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scholardata sun ac za | connector:scholardata_sun_ac_za@1.0.0 | |
| concepts[field].local:field:humanities | mapping · dayta nwu ac za | connector:dayta_nwu_ac_za@1.0.0 | |
| concepts[field].local:field:humanities | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · datahub hku hk | connector:datahub_hku_hk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scholardata sun ac za | connector:scholardata_sun_ac_za@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · figshare dmu ac uk | connector:figshare_dmu_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · grantsdata jst go jp | connector:grantsdata_jst_go_jp@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · figshare swinburne edu au | connector:figshare_swinburne_edu_au@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · dayta nwu ac za | connector:dayta_nwu_ac_za@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:materials-science | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:mathematics-statistics | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · grantsdata jst go jp | connector:grantsdata_jst_go_jp@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · figshare dmu ac uk | connector:figshare_dmu_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · datahub hku hk | connector:datahub_hku_hk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · figshare swinburne edu au | connector:figshare_swinburne_edu_au@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · dayta nwu ac za | connector:dayta_nwu_ac_za@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · scholardata sun ac za | connector:scholardata_sun_ac_za@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:ocean-atmospheric | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:psychology-behavioral | mapping · scholardata sun ac za | connector:scholardata_sun_ac_za@1.0.0 | |
| concepts[field].local:field:psychology-behavioral | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:social-science | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:social-science | mapping · dayta nwu ac za | connector:dayta_nwu_ac_za@1.0.0 | |
| concepts[field].local:field:social-science | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scholardata sun ac za | connector:scholardata_sun_ac_za@1.0.0 | |
| concepts[field].local:field:social-science | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[modality].local:modality:tabular | enrichment · zivahub uct ac za | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/description |
| license | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/rights |
| publication_date | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| title | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/title |