Data · collection · 2021
Gross Primary Production data collected from the K-Axis voyage of the Aurora Australis, 2016
Listed in NASA Earthdata CMR
Gross Primary Production Six depths were sampled per CTD station ranging from near-surface to 125 m.
Description
Sample depths were based on downward fluorescence profiles and two of six samples always included both near-surface (approximately 5-10 m) and the depth of the chlorophyll maximum where applicable. Photosynthetic rates were determined using radioactive NaH14CO3.
Incubations were conducted according to the method of Westwood et al. (2011). Cells were incubated for 1 hour at 21 light intensities ranging from 0 to 1200 µmol m-2 s-1 (CT Blue filter centred on 435 nm). Carbon uptake rates were corrected for in situ chlorophyll a (chl a) concentrations (µg L-1) measured using high performance liquid chromatography (HPLC, Wright et al. 2010), and for total dissolved inorganic carbon availability, analysed according to Dickson et al. (2007).
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Photosynthesis-irradiance (P-I) relationships were then plotted in R and the equation of Platt et al. (1980) used to fit curves to data using robust least squares non-linear regression. Photosynthetic parameters determined included light-saturated photosynthetic rate [Pmax, mg C (mg chl a)-1 h-1], initial slope of the light-limited section of the P-I curve [α, mg C (mg chl a)-1 h-1 (µmol m-2 s-1)-1], light intensity at which carbon-uptake became maximal (calculated as Pmax/ α = Ek, µmol m-2 s-1), intercept of the P-I curve with the carbon uptake axis [c, mg C (mg chl a)-1 h-1] , and the rate of photoinhibition where applicable [β, mg C (mg chl a)-1 h-1 (µmol m-2 s-1)-1].
Gross primary production rates were modelled using R. Depth interval profiles (1 m) of chl a from the surface to 200 m were constructed through the conversion of up-cast fluorometry data measured at each CTD station. For conversions, pooled fluorometry burst data from all sites and depths was linearly regressed against in situ chl a determined using HPLC. Gross daily depth-integrated water-column production was then calculated using chl a depth profiles, photosynthetic parameters (Pmax, α , β, see above), incoming climatological PAR, vertical light attenuation (Kd), and mixed layer depth.
Climatological PAR was based on spatially averaged (49 pixels, approx. 2 degrees) 8 day composite Aqua MODIS data (level 3, 2004-2017) obtained for Julian day 34. Summed incoming light intensities throughout the day equated to mean total PAR provided by Aqua MODIS. Kd for each station was calculated through robust linear regression of natural logarithm-transformed PAR data with depth.
In cases where CTD stations were conducted at night, Kd was calculated from a linear relationship established between pooled chlorophyll a concentrations and Kd’s determined at CTD stations conducted during the day (Kd = -0.0421 chl a
- -0.0476). Mixed layer depths were calculated as the depth where density (sigma) changed by 0.05 from a 10 m reference point. Gross primary production was calculated at 0.1 time steps throughout the day (10 points per hour) and summed.
Links
Get the data
- Download the dataset. data.aad.gov.au/eds/5080/download ↗
download · from NASA CMR
Where it is published
- DOI doi.org/10.26179/5e4f6d873c078 ↗
DOI / persistent id · from NASA CMR
Documentation and papers
- data.aad.gov.au /aadc/metadata/citation.cfm?entry_id=AAS_4344_Gross_Primary_Pro… ↗
Citation reference for this metadata record and dataset.
documentation · from NASA CMR
- Public information for AAS project AAS_4344 secure3.aad.gov.au/proms/public/projects/report_project_public.cfm?project_no=AAS… ↗
project · from NASA CMR
Catalogue records · 2
- CMR UMM-JSON cmr.earthdata.nasa.gov/search/concepts/C1703260582-AU_AADC.umm_json ↗
metadata API · from NASA CMR
- CMR record cmr.earthdata.nasa.gov/search/concepts/C1703260582-AU_AADC.html ↗
catalogue entry · from NASA CMR
Topics
- Stated by source
- Conductivity, Temperature, Depth · Low Background Liquid Scintillation Counter · Phytoplankton · Primary Production · R/V Aurora Australis
- Inferred from text
- Computed tomography 50% · Geophysics 71%
Provenance · 1 source records, 15 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NASA Earthdata CMR | C1703260582-AU_AADC | 8 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[field].anzsrc:group:3706 | enrichment · NASA CMR | taxonomy-embedding@1.1.0 | title+keywords+description (71%) |
| concepts[instrument].gcmd_instrument:ctd | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[instrument].gcmd_instrument:lblsc | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[measured_variable].gcmd:earth-science/biosphere/ecological-dynamics/ecosystem-functions/primary-production | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[measured_variable].gcmd:earth-science/biosphere/ecosystems/aquatic-ecosystems/plankton/phytoplankton | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[modality].local:modality:ct | enrichment · NASA CMR | keyword-concept-rules@1.0.0 | title+description (50%) |
| concepts[platform].gcmd_platform:r-v-aa | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| description | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/Abstract |
| license_text | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| publication_date | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| spatial | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/SpatialExtent |
| temporal | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/TemporalExtents |
| title | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/EntryTitle |
| version_label | source · NASA CMR | connector:nasa_cmr@1.0.0 |