Data · dataset · 2021
Dataset for: Genome wide asociation study (GWAS) to identify favourable alleles for late blight resistance in core collection
Listed in International Potato Center
The assessment of late blight resistance in accessions of the CIP core collection and the European potato collection during two consecutive rainy seasons under field conditions with high endemic disease pressure located in Oxapampa (1810 masl Pasco-Perú) were conducted.
Description
Randomized complete block design (RBDC) with three replications of 8 hill plots which were adjusted to a row-column design in the first season and second season using row-column design with three replications of 5 hill plots were established.
After 40 days after planting (DAP), the percentage of leaf area affected by late blight infection was recorded by plot throughout the season to subsequently compute the area under the disease progress curve (AUDPC). AUDPC values are used to compute the predicted susceptibility scale value of any candidate genotype within a scale where increasing numbers represent increasing susceptibility.
Links
Where it is published
- Dataverse dataset page data.cipotato.org/dataset.xhtml?persistentId=doi%3A10.21223%2FYT4UZU ↗
landing page · from data cipotato org
- DOI doi.org/10.21223/yt4uzu ↗
DOI / persistent id · from data cipotato org
Catalogue records · 1
- Dataverse API data.cipotato.org/api/datasets/:persistentId/?persistentId=doi%3A10.21223%2FYT4U… ↗
metadata API · from data cipotato org
Topics
- Stated by source
- Agricultural Sciences
- From keywords
- Life Sciences
- Inferred from text
- Agriculture, land and farm management 71% · Disease 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| International Potato Center | doi:10.21223/YT4UZU | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[disease].local:disease:disease | enrichment · data cipotato org | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].anzsrc:group:3002 | enrichment · data cipotato org | taxonomy-embedding@1.1.0 | title+keywords+description (71%) |
| concepts[field].dataverse_subject:agricultural-sciences | source · data cipotato org | connector:data_cipotato_org@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · data cipotato org | connector:data_cipotato_org@1.0.0 | /subjects |
| created_date | source · data cipotato org | connector:data_cipotato_org@1.0.0 | |
| description | source · data cipotato org | connector:data_cipotato_org@1.0.0 | /description |
| publication_date | source · data cipotato org | connector:data_cipotato_org@1.0.0 | |
| title | source · data cipotato org | connector:data_cipotato_org@1.0.0 | /name |
| updated_date | source · data cipotato org | connector:data_cipotato_org@1.0.0 | |
| version_label | source · data cipotato org | connector:data_cipotato_org@1.0.0 |