Excel · study · 2026
Integrated Transcriptome and Metabolome Analysis Reveals Novel Metabolic Pathways and Metabolites in Moderate-to-Severe Psoriasis
Listed in NCBI GEO
Description
Background
Psoriasis is a common immune-mediated disease; however, the understanding of its metabolic pathways remains incomplete.
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Methods
Blood samples from 11 patients with psoriasis and 11 matched healthy controls were subjected to integrated transcriptomic and untargeted metabolomic profiling, followed by comprehensive statistical analysis.Results:We identified 4,887 metabolites and 53 metabolic pathways. Integration with transcriptomic data from the patients revealed six co-regulated pathways: arachidonic acid, central carbon metabolism in cancer, cysteine and methionine, lysine degradation, propanoate, and tryptophan metabolism.
Further analysis revealed associated gene and metabolite alterations. To our knowledge, central carbon metabolism in cancer is newly linked to psoriasis. The other pathways are poorly documented; our results validate and extend previous reports.Conclusions:Integrated multi-omics profiling identified six dysregulated metabolic pathways in psoriasis, including a novel association with central carbon metabolism in cancer.
Our findings confirm and extend knowledge on poorly documented pathways, offering new insights into psoriasis pathogenesis and potential therapeutic targets.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE307nnn/GSE307888 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307888 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1327676 ncbi.nlm.nih.gov/bioproject/PRJNA1327676 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Biochemistry and cell biology 71% · Cancer 75% · Disease 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE307888 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].anzsrc:group:3101 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (71%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |