Omics · study · 2026
Single-cell transcriptomic and TCR profiling of long-term persisting CD19 CAR-T cells from patient peripheral blood
Listed in NCBI GEO
This study profiles patient peripheral blood mononuclear cells (PBMCs) enriched for CAR-T cells using the 10x Genomics Chromium Single Cell 5′ platform.
Description
Two PBMC samples — peak patient #21 and year 9.3 patient #21 — were analyzed. Both gene expression (GEX) and T cell receptor (TCR V(D)J) libraries were prepared and sequenced on the Illumina NextSeq 2000 system.
Processed data include filtered count matrices and clonotype annotation tables for downstream reanalysis.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE311nnn/GSE311890 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE311890 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1371895 ncbi.nlm.nih.gov/bioproject/PRJNA1371895 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens · Other
- From keywords
- Life Sciences
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE311890 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |