Omics · study · 2026
A High-Resolution Single-Cell Transcriptomic Atlas of Asexual Budding in the Stony Coral Galaxea fascicularis
Listed in NCBI GEO
Asexual reproduction via budding is a fundamental process driving the expansion of coral colonies and maintaining reef resilience.
Description
This study presents a spatiotemporal single-cell transcriptome atlas of asexual budding in G. fascicularis. We profiled the transcriptomic heterogeneity across four discrete morphological stages: the basal coenosarc, the active budding tip, the early polyp, and the mature polyp.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE333nnn/GSE333517 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333517 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1471221 ncbi.nlm.nih.gov/bioproject/PRJNA1471221 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Evolutionary biology 72%
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE333517 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3104 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (72%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |