Omics · study · 2026
Hypoxia-driven calcium imbalance causes lysosomal dysfunction and alters macrophage proteolysis and host defense
Listed in NCBI GEO
Macrophages clear pathogens and cellular debris via lysosomal degradation.
Description
During inflammation, macrophages experience hypoxia, yet the dynamics and function of their organelles, including lysosomes, remains largely unknown under oxygen restriction. We addressed this knowledge gap and discovered that hypoxia triggers the formation of enlarged late endosomes/lysosomes which localize to the cell periphery in macrophages from various mammalian species.
The degradation ability of macrophages, especially the activity of lysosomal cathepsins, was severely impaired under oxygen restriction. Defective proteolysis under hypoxia was due to lysosomal alkalization due to excessive calcium accumulation. This process was primarily controlled by the activation of the ryanodine receptors (RyR), a class of ER calcium transporters.
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These calcium-induced changes also altered cathepsin activity in mycobacteria-infected macrophages under hypoxic conditions. Although lysosomal cathepsins were essential for killing mycobacteria under oxygen restriction, RyR inhibition alone did not affect bacterial loads, despite partly restoring cathepsin activity. Our findings show that hypoxia alters lysosomal homeostasis via dysregulated calcium accumulation and these alterations directly impact on host proteolysis and responses to infection in macrophages.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE308nnn/GSE308405 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE308405 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1330351 ncbi.nlm.nih.gov/bioproject/PRJNA1330351 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE308405 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |