Excel · study · 2026
Identification of Enhancers and Transcription Factors Regulating Developmental and Functional Maturation of Skeletal Muscle [ChIP-Seq]
Listed in NCBI GEO
We profiled the enhancer landscape of skeletal muscle from neonatal and adult cattle using ChIP-seq for H3K27ac, a marker of active enhancers.
Description
We identified 8,602 and 13,034 high-confidence H3K27ac-enriched regions in neonatal and adult muscle, respectively. Among these, 1,194 enhancers were specific to neonatal muscle and 1,478 were specific to adult muscle.
In addition, 769 super-enhancers were identified in neonatal muscle and 527 in adult muscle.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE329nnn/GSE329091 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329091 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1457544 ncbi.nlm.nih.gov/bioproject/PRJNA1457544 ↗
project · from NCBI GEO
- PubMed 42589115 pubmed.ncbi.nlm.nih.gov/42589115 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Genome binding/occupancy profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE329091 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |