Data · dataset · 2025
Early Warning and Rapid Public Health Response to Prevent COVID-19 Outbreaks in Long-term Care Facilities (LTCF) by Monitoring SARS-CoV-2 RNA in LTCF Site-specific Sewage Samples and Assessment of Antibodies Response in this Population [SSSIS, study data contributed to the CITF Databank]
Listed in Borealis
Description
Background
Residents of Canadian long-term care facilities (LTCF) experience challenges with social distancing and the movement of staff between the facility and their communities, which increases their vulnerability to COVID-19. Aims of the CITF-funded study: The SSSIS study aimed to 1) investigate and conduct a cost-benefit analysis on the use of a site-specific sewage surveillance of SARS-CoV-2 as an early warning system to prevent outbreaks in LTCFs; 2) study the antibody response of residents and staff in LTCFs; and 3) evaluate the execution of commercial assays aimed to detect vaccine-induced antibodies and the correlation with neutralizing antibody responses.
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Methods
For Part I of this study where the unit of analysis was long-term care facilities, sewage samples were monitored semiweekly: if the sample tested negative for SARS-CoV-2, no action was taken, but positive results warranted an investigation if necessary. Part II was a cohort study was conducted in a different set of LTCF, where residents and staff were recruited from the LTCF Associations across Edmonton region of Alberta.
Participants completed a questionnaire and provided a blood sample (venipuncture or DBS) at baseline and at follow-ups pre-vaccine, pre-second dose, and 3-, 6-, 12-, and 18-months post second dose. Summary of dataset contents: For Part I of this study, a total of 2,936 sewage samples were collected from 12 sites between Jan 2021 and May 2023: 36% (1,058) of the sewage samples were tested positive for SARS-CoV-2. For Part II of this study, the datasets include 364 participants (241 staffs and 123 residents) who completed a questionnaire between Feb 2021 and Aug 2021.
All participants provided one or more blood samples at baseline and during follow-up visits up to Dec 2022. A total of 966 blood samples were collected. Variables include data in the following areas of information: demographics (age, gender), exposure risk factors (dining place for residence, working site for staff), longitudinal follow-up for COVID infections (COVID test) and vaccination, and serology.
Links
Where it is published
- Dataverse dataset page borealisdata.ca/dataset.xhtml?persistentId=doi%3A10.5683%2FSP3%2FFTGRFQ ↗
landing page · from borealisdata ca
- DOI doi.org/10.5683/sp3/ftgrfq ↗
DOI / persistent id · from borealisdata ca
Catalogue records · 1
- Dataverse API borealisdata.ca/api/datasets/:persistentId/?persistentId=doi%3A10.5683%2FSP3%2… ↗
metadata API · from borealisdata ca
Topics
- Stated by source
- Medicine, Health and Life Sciences
- From keywords
- Life Sciences · Medicine & Health · Public health
- Inferred from text
- Longitudinal study 65%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Borealis | doi:10.5683/SP3/FTGRFQ | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:group:4206 | mapping · borealisdata ca | vocabulary-mapper@1.0.0 | keywords['Public Health'] |
| concepts[field].dataverse_subject:medicine-health-and-life-sciences | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · borealisdata ca | connector:borealisdata_ca@1.0.0 | /subjects |
| concepts[field].local:field:medicine-health | mapping · borealisdata ca | connector:borealisdata_ca@1.0.0 | /subjects |
| concepts[method].local:method:longitudinal-study | enrichment · borealisdata ca | keyword-concept-rules@1.0.0 | title+description (65%) |
| created_date | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | |
| description | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | /description |
| publication_date | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | |
| title | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | /name |
| updated_date | source · borealisdata ca | connector:borealisdata_ca@1.0.0 | |
| version_label | source · borealisdata ca | connector:borealisdata_ca@1.0.0 |