Omics · study · 2026
The diazeniumdiolate signal valdiazen is a global regulator of virulence and secondary metabolism in Burkholderia plantarii
Listed in NCBI GEO
The diazeniumdiolate signal family, first identified in Burkholderia cenocepacia H111, now includes a newly discovered member in the rice pathogen Burkholderia plantarii PG1.
Description
Here, we show that the ham gene cluster directs the biosynthesis of the diazeniumdiolate signal valdiazen and is required for both antifungal activity and virulence. Transcriptome analysis identified a valdiazen regulon comprising 390 genes, including genes within and flanking the ham cluster, indicating roles in signal modulation, transport and autoregulation.
Valdiazen also globally controls genes involved in secondary metabolism and the expression of several bioactive metabolites, including those required for tropolone biosynthesis and the type III secretion system. We further identify tropolone as the major antifungal metabolite of B. plantarii and demonstrate that its antifungal activity is mediated through iron chelation. An AraC family transcriptional regulator located upstream of the ham cluster regulates valdiazen biosynthesis and the downstream regulatory network.
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Together, these results establish valdiazen as a global signaling molecule that coordinates diverse aspects of bacterial physiology and integrates with the three classical homoserine lactone-based quorum-sensing systems.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE343nnn/GSE343381 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE343381 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1511294 ncbi.nlm.nih.gov/bioproject/PRJNA1511294 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE343381 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |