Excel · study · 2026
Pseudopodia couple microenvironmental sensing to adaptive transcriptional reprogramming
Listed in NCBI GEO
Pseudopodia are actin-rich membrane extensions that allow cells to sense and respond to environmental cues, including hypoxia, inflammation, and chemotactic signals.
Description
Although these sensory structures are thought to transmit information from the cell periphery to the nucleus to regulate cell-state changes, including those involved in cancer progression, the underlying mechanisms remain poorly understood. To address this gap, we used a unique combination of intracellular spatial multiomics approaches to identify transcription factors and chromatin remodeling genes enriched within protrusions.
Our findings reveal that these transcriptional regulators are selectively positioned for local translation in pseudopodia and subsequent transport to the nucleus, where they can drive rapid genetic reprogramming. These findings reveal a previously underappreciated function of pseudopodia as spatially organized genetic regulatory structures that enable cells, including cancer cells, to rapidly adapt to diverse microenvironmental stressors.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE337nnn/GSE337019 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE337019 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1483720 ncbi.nlm.nih.gov/bioproject/PRJNA1483720 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE337019 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |