Omics · study · 2026
Alternative splicing diversifies HSF1 function to enable desiccation tolerance of P. vanderplanki cells
Listed in NCBI GEO
Heat shock factor 1 (HSF1) is a transcription factor that contributes to induction of desiccation tolerance and allow larvae of Polypedilum vanderplanki successfully enter anhydrobiosis state.
Description
Here we report the identification of five alternative splicing isoforms of P. vanderplanki HSF1 (PvHSF1) and their distinct functional roles during anhydrobiosis cycle and heat shock in Pv11 cells, derived from P. vanderplanki. All five PvHSF1 isoforms induced desiccation tolerance, but with varible efficiency followed by distinct gene expression patterns.
We revealed that PvHSF1 isoform 2 is the most abundant isoform in the anhydrobiosis state. It directly regulates gene esxpression resulting in both activation and suppression. Other two PvHSF1 isoforms (1 and 3) were responsible for cell adaptation to severe heat shock by modulating expression of genes.
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Importantly, none of Drosophila melanogaster HSF1 (DmHSF1) splicing isoforms were able to induce the desiccation tolerance tolerance, while one DmHSF1 isoform (a) resulted in Pv11 cells survival after heat shock. Our results demonstrate that PvHSF1 splicing isoforms possess distinct regulatory roles in anhydrobiosis and heat shock to cope with different stress conditions.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE306nnn/GSE306647 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE306647 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1311560 ncbi.nlm.nih.gov/bioproject/PRJNA1311560 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE306647 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |