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Data · dataset · 2026

<p>The percentage of variants above folding free energy thresholds.</p>

Listed in ZivaHub and Deakin Research Online and DMU Figshare — shown once because both records carry DOI 10.1371/journal.pgen.1012085.g006

Description

<p>Panel A shows the number (left axis, solid lines) and fraction (right axis, dashed lines) of labeled variants that are pathogenic (containing likely pathogenic and pathogenic) and benign (containing likely benign and benign) with a predicted value above the threshold defined by the X-axis.Panel B focuses on the number (left axis, solid lines) and fraction (right axis, dashed lines) of VUS that reach either the strong posterior (0.6) or very strong posterior (0.98) with a value above the threshold defined by the X-axis.

Panel C plots the percentage of variants that with value above a series of thresholds for labeled variants and for the VUS above the posterior of 0.98. Panel D shows the genes where at least 50% of their LP/P variants have a of at least 1 kcal/mol. Genes with less than 50% of their pathogenic variants above the threshold are included in Fig E in the <a href="plosgenetics.org/article/info:doi/10.1371/journal.pgen.1012085#pgen.1012085.s001" target="_blank">S1 Appendix</a>.

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Any genes with less than 10 labeled pathogenic/likely pathogenic variants are excluded from this analysis.</p>

Links

Where it is published

Catalogue records · 1

Topics

Provenance · 3 source records, 26 field assertions
SourceKeyLast seenRaw
ZivaHuboai:figshare.com:article/3403613611 d agoJSON v1
Deakin Research Onlineoai:figshare.com:article/3403613611 d agoJSON v1
DMU Figshareoai:figshare.com:article/3403613611 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].anzsrc:field:320211mapping · dro deakin edu auvocabulary-mapper@1.0.0keywords['Infectious Diseases']
concepts[field].anzsrc:field:320211mapping · figshare dmu ac ukvocabulary-mapper@1.0.0keywords['Infectious Diseases']
concepts[field].anzsrc:field:320211mapping · zivahub uct ac zavocabulary-mapper@1.0.0keywords['Infectious Diseases']
concepts[field].anzsrc:group:3105mapping · figshare dmu ac ukvocabulary-mapper@1.0.0keywords['Genetics']
concepts[field].anzsrc:group:3105mapping · zivahub uct ac zavocabulary-mapper@1.0.0keywords['Genetics']
concepts[field].anzsrc:group:3105mapping · dro deakin edu auvocabulary-mapper@1.0.0keywords['Genetics']
concepts[field].anzsrc:group:3108mapping · dro deakin edu auvocabulary-mapper@1.0.0keywords['Plant Biology']
concepts[field].anzsrc:group:3108mapping · figshare dmu ac ukvocabulary-mapper@1.0.0keywords['Plant Biology']
concepts[field].anzsrc:group:3108mapping · zivahub uct ac zavocabulary-mapper@1.0.0keywords['Plant Biology']
concepts[field].local:field:earth-environmentalmapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:earth-environmentalmapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
concepts[field].local:field:earth-environmentalmapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
concepts[field].local:field:life-sciencesmapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:life-sciencesmapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
concepts[field].local:field:life-sciencesmapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
concepts[field].local:field:mathematics-statisticsmapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
concepts[field].local:field:mathematics-statisticsmapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:mathematics-statisticsmapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
concepts[field].local:field:medicine-healthmapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
concepts[field].local:field:medicine-healthmapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:medicine-healthmapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
descriptionsource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0/metadata/dc/description
licensesource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0/metadata/dc/rights
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titlesource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0/metadata/dc/title