Omics · study · 2026
Cell cycle exit is required for differentiation and cell fate diversification but not neoblast specialisation in planarians
Listed in NCBI GEO
In planarian, adult stem cells constantly proliferate and differentiate into dozens of different cell types to maintain tissue homeostasis.
Description
However, how cell fate acquisition is coordinated with cell cycle progression remains poorly understood. To address this, we generated single-cell RNA-sequencing datasets from cells enriched for 2C or 4C DNA content and from animals subjected to RNAi against the cell cycle regulators cdh1 and h2b.
We found that progenitor populations from multiple lineages contain actively cycling cells enriched in the 4C state. Cell fate acquisition to most cell types is acquired progressively during neoblast differentiation. Comparative analysis of cell cycle regulators confirmed a simplified regulatory repertoire in Schmidtea, supporting a central role for cdh1 in controlling cell cycle exit.
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RNAi-mediated knockdown of cdh1 caused homeostasis defects, impaired regeneration, accumulation of neoblasts and depletion of progenitors. Together, our findings demonstrate that cell cycle exit is required for terminal differentiation but not for neoblast specialisation. Instead, lineage commitment is initiated in actively cycling neoblasts, whereas terminal differentiation depends on cdh1-mediated cell cycle exit.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE346nnn/GSE346035 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE346035 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1522793 ncbi.nlm.nih.gov/bioproject/PRJNA1522793 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE346035 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |