Data · dataset · 2026
<p>Whole-genome phylogeny from 1,061,546 phylogenetically informative, nuclear single nucleotide variants.</p>
Listed in UCL Research Data Repository
<p>A species tree generated with SVD quartets recovered monophyletic clades for miracidia sampled from humans and those sampled from cattle<i>.</i> Published <i>S. curassoni.
Description
S. guineensis</i> are included<i>,</i> and we used <i>S. margrebowiei</i> to root the tree<i>.</i> Mitotype, ITS genotype, and the <i>S. haematobium</i> ancestry component from the Admixture analysis are plotted at the tips of the tree. Mitotypes and ITS genotypes did not correspond consistently with clade structure.
In contrast, the <i>S. haematobium</i> ancestry component clearly differentiates the <i>S. haematobium</i> clade from humans from the livestock <i>Schistosoma</i> clades. These results show that mitochondrial and ITS markers are not consistent with whole-genome ancestry patterns. Clades supported in ≥90% of bootstrap replicates are indicated with a “*”.
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Samples lacking an ITS are designated with “NA”. In each case these were samples sequenced in previous work. The human and cow silhouettes indicate the host from which each parasite was sampled.</p>
Links
Where it is published
- DOI doi.org/10.1371/journal.ppat.1014625.g004 ↗
DOI / persistent id · from rdr ucl ac uk
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from rdr ucl ac uk
Topics
- From keywords
- Cancer · Earth & Environmental Science · Ecology · Genetics · Infectious diseases · Life Sciences · Medicine & Health · Microbiology
Provenance · 1 source records, 13 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| UCL Research Data Repository | oai:figshare.com:article/34049413 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · rdr ucl ac uk | connector:rdr_ucl_ac_uk@1.0.0 | |
| concepts[disease].local:disease:cancer | mapping · rdr ucl ac uk | vocabulary-mapper@1.0.0 | keywords['Cancer'] |
| concepts[field].anzsrc:field:320211 | mapping · rdr ucl ac uk | vocabulary-mapper@1.0.0 | keywords['Infectious Diseases'] |
| concepts[field].anzsrc:group:3103 | mapping · rdr ucl ac uk | vocabulary-mapper@1.0.0 | keywords['Ecology'] |
| concepts[field].anzsrc:group:3105 | mapping · rdr ucl ac uk | vocabulary-mapper@1.0.0 | keywords['Genetics'] |
| concepts[field].anzsrc:group:3107 | mapping · rdr ucl ac uk | vocabulary-mapper@1.0.0 | keywords['Microbiology'] |
| concepts[field].local:field:earth-environmental | mapping · rdr ucl ac uk | connector:rdr_ucl_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · rdr ucl ac uk | connector:rdr_ucl_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · rdr ucl ac uk | connector:rdr_ucl_ac_uk@1.0.0 | |
| description | source · rdr ucl ac uk | connector:rdr_ucl_ac_uk@1.0.0 | /metadata/dc/description |
| license | source · rdr ucl ac uk | connector:rdr_ucl_ac_uk@1.0.0 | /metadata/dc/rights |
| publication_date | source · rdr ucl ac uk | connector:rdr_ucl_ac_uk@1.0.0 | |
| title | source · rdr ucl ac uk | connector:rdr_ucl_ac_uk@1.0.0 | /metadata/dc/title |