Omics · study · 2026
Effects of Er:YAG laser irradiation on proliferation and alteration of gene expression in the MLO-Y4 osteocyte-like cells
Listed in NCBI GEO
Objective: The aim of this study was to investigate the effects of Er:YAG laser irradiation on MLO-Y4 osteocyte-like cells.
Description
Materials and
Methods
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MLO-Y4 cells were seeded before 72h laser-irrdiation and irradiated by Er:YAG laser at energy fluences of 3.1, 6.0 and 8.9 J/cm2. To evaluate thermal effects, cell surface temperature and gene expression of Hspa1a were measured. For evaluation of cell proliferation and cytotoxicity, CCK-8 assay, and Lactate dehydrogenase (LDH) assay of the laser-irradiated cells were performed.
RNA-sequencing analysis was performed at 6h after 6.0 J/cm2 laser-irradiation and non-irradiated cells. Result: According to surface temperature and Hspa1a expression, no thermal effects were observed at 6.0 J/cm2 irradiation. CCK-8 assay revealed a significant increase in proliferative activity was observed, although LDH levels showed a slight but significant increase at 6.0 J/cm2 laser-irradiation.
RNA-seq analysis identified 337 differently expressed genes. Epha, Itga5, and Tcf7, associated with mechanical stimulation, were highly upregulated in the laser-irradiated cells. KEGG pathway analysis showed upregulation of PI3K-Akt signaling pathway in the laser-irradiated cells.
Upregulated DEGs belong to GO term of cellular components “euchromatin” in the laser-irradiated cells. Gene set enrichment analysis showed enrichment of TGF-beta signaling gene set and downregulation of mTORC1 signaling gene set in the laser-irradiated cells. Conclusion: Er:YAG laser irradiation promotes the proliferation of MLO-Y4 cells, osteocyte-like cells, via altering cell proliferation and mechanotransduction-related gene expression.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE295nnn/GSE295519 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE295519 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1255092 ncbi.nlm.nih.gov/bioproject/PRJNA1255092 ↗
project · from NCBI GEO
- PubMed 41126643 pubmed.ncbi.nlm.nih.gov/41126643 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE295519 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |