Table · dataset · 2023
Mosquito metabolism shapes life-history strategies of Plasmodium parasites
Listed in Edmond
This project simulates mosquito population dynamics and malaria transmission as described in the research paper "Mosquito metabolism shapes Plasmodium life-history traits".
Description
The modelling framework consists of an individual-based model with an extensive description of mosquito biology. Specifically, this is the first model that includes a description of nutrient allocation inside female mosquitoes and their interactions with growing malaria parasites.
Description of the data and file structure The data from our simulations is organized with variations based on different initial Tsp values and whether the model excluded (control) or included mosquito metabolism (metabolism). The directories are organized as follows: 1. Control simulations You will find three directories named "control_11", "control_12", and "control_13", where all results from the simulations excluding mosquito metabolism (control model), and with different starting conditions for Tsp, i.e., Tsp(0) = 11 - 13 days. 2.
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Metabolism simulations Similarly, you will find three directories named "metabolism_11", "metabolism_12", "metabolism_13", where results from simulations including the description of mosquito metabolism are stored. 3. Evolutionary simulations You will find four directories that follow a structure for both conditions (control and metabolism) and initial Tsp values (Tsp(0)) "condition_evo_TSP(0)". In every directory, you will find a subdirectory with all the simulated and analyzed data.
Every simulation produces the following files: femaleParameters.csv humanParameters.csv IncubationPeriod.csv larvaParameters.csv PopulationSize.csv TransmissionProfileMosquitoes.csv Code/Software The individual-based model was implemented in the C++ programming language. All analysis were performed using R version 3.5. The code is available under: gitlab.mpcdf.mpg.de/vectorbiology/mosquito_metabolism/vectorbornemodel_release
Links
Where it is published
- Dataverse dataset page edmond.mpg.de/dataset.xhtml?persistentId=doi%3A10.17617%2F3.41DUIB ↗
landing page · from edmond mpdl mpg de
- DOI doi.org/10.17617/3.41duib ↗
DOI / persistent id · from edmond mpdl mpg de
Catalogue records · 1
- Dataverse API edmond.mpg.de/api/datasets/:persistentId/?persistentId=doi%3A10.17617%2F3.41… ↗
metadata API · from edmond mpdl mpg de
Topics
- From keywords
- Astronomy & Astrophysics · Chemistry · Computer Science & AI · Earth & Environmental Science · Economics & Finance · Engineering · Humanities · Life Sciences · Materials Science · Medicine & Health · Ocean & Atmospheric Science · Physics · Social Science
- Inferred from text
- Life histories 75% · Simulation 75%
Provenance · 2 source records, 21 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Edmond | doi:10.17617/3.41DUIB | 13 d ago | JSON v1 |
| Edmond | doi:10.17617/3.41DUIB | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
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| concepts[field].local:field:astronomy | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:chemistry | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:computer-science-ai | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:earth-environmental | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:economics-finance | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:engineering | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:humanities | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:materials-science | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:medicine-health | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:ocean-atmospheric | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:physics | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:social-science | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[method].local:method:simulation | enrichment · edmond mpdl mpg de | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · edmond mpdl mpg de | connector:edmond_mpdl_mpg_de@1.0.0 | |
| description | source · edmond mpdl mpg de | connector:edmond_mpdl_mpg_de@1.0.0 | /description |
| publication_date | source · edmond mpdl mpg de | connector:edmond_mpdl_mpg_de@1.0.0 | |
| title | source · edmond mpdl mpg de | connector:edmond_mpdl_mpg_de@1.0.0 | /name |
| updated_date | source · edmond mpdl mpg de | connector:edmond_mpdl_mpg_de@1.0.0 | |
| version_label | source · edmond mpdl mpg de | connector:edmond_mpdl_mpg_de@1.0.0 |