Omics · study · 2026
Prior targeted therapy treatment and cellular composition modulate the effects of Axl inhibition on myeloid cells in the human in vitro melanoma tumor microenvrionment
Listed in NCBI GEO
Axl has gained momentum as a promising target in cancer therapy due to its contribution to both cancer progression and immunosuppression.
Description
While pre-clinical studies in mice have demonstrated its potential as a dual target - to be both tumoricidal and immunostimulatory - clinical trials have reported mixed results. We built a human in vitro model system to understand how prior standard-of-care treatment in the context of melanoma impacts the effects of the small molecule Axl inhibitor bemcentinib on myeloid cells in the tumor microenirnoment.
In our previous work we reported differences in macrophage state and activity primarily resulted from whether the melanoma cells they were co-cultured with had prior trametinib + dabrafenib treatment, and that this then impacted the macrophage resposne to Axl inhibition. We also showed that the addition of donor-matched dendritic cells to the in vitro system resulted in a dampened macrophage response. In this current work, we generated single-cell RNA-sequencing data to understand the changes in cell signaling that underlie our previously reported observations.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE310nnn/GSE310271 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310271 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1365680 ncbi.nlm.nih.gov/bioproject/PRJNA1365680 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE310271 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |